Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269331

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269331


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T316Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000115414 FN1 fibronectin 1 120.2089
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 110.3694
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 89.7343
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 59.4114
5 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 41.8187
6 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 35.7477
7 ENSG00000091986 CCDC80 coiled-coil domain containing 80 34.2862
8 ENSG00000184009 ACTG1 actin gamma 1 27.3374
9 ENSG00000182718 ANXA2 annexin A2 27.2777
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 26.7170

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0764
58502 ENSG00000285733 novel protein -0.0764
58501 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0764
58500 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0764
58499 ENSG00000285730 novel transcript -0.0764
58498 ENSG00000285729 novel transcript -0.0764
58497 ENSG00000285728 novel transcript, antisense to PPIH -0.0764
58496 ENSG00000285727 novel transcript -0.0764
58495 ENSG00000285726 novel transcript -0.0764
58494 ENSG00000285724 novel transcript -0.0764

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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