SHOGoiN Cell Transcriptome: GSM1272003

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1272003


Profile download
3080101000001000000000-254Sequence Read ArchiveSRP033209SRP033209_T142High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult)TranscriptomeType II pneumocyte (Distal lung epithelium)MouseLungRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000022097 Sftpc surfactant associated protein C 186.1020
2 ENSMUSG00000092341 Malat1 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 75.2339
3 ENSMUSG00000069516 Lyz2 lysozyme 2 67.0727
4 ENSMUSG00000021789 Sftpa1 surfactant associated protein A1 58.8161
5 ENSMUSG00000102349 Gm37376 predicted gene, 37376 55.6662
6 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 23.4987
7 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 19.9670
8 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 17.4375
9 ENSMUSG00000002944 Cd36 CD36 molecule 14.9080
10 ENSMUSG00000029188 Slc34a2 solute carrier family 34 (sodium phosphate), member 2 9.4672

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54189 ENSMUSG00000116984 4930549P19Rik RIKEN cDNA 4930549P19 gene -0.0303
54188 ENSMUSG00000116983 4930553J12Rik RIKEN cDNA 4930553J12 gene -0.0303
54187 ENSMUSG00000116982 4930567J20Rik RIKEN cDNA 4930567J20 gene -0.0303
54186 ENSMUSG00000116981 Gm49611 predicted gene, 49611 -0.0303
54185 ENSMUSG00000116980 Gm49597 predicted gene, 49597 -0.0303
54184 ENSMUSG00000116979 Gm32865 predicted gene, 32865 -0.0303
54183 ENSMUSG00000116978 Gm49765 predicted gene, 49765 -0.0303
54182 ENSMUSG00000116977 Gm49637 predicted gene, 49637 -0.0303
54181 ENSMUSG00000116976 4930500H12Rik RIKEN cDNA 4930500H12 gene -0.0303
54180 ENSMUSG00000116975 4930470H14Rik RIKEN cDNA 4930470H14 gene -0.0303

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...