SHOGoiN Cell Transcriptome: GSM1280169

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280169


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7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T203Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000092341 Malat1 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 107.4958
2 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 96.0296
3 ENSMUSG00000098178 Gm42418 predicted gene, 42418 69.9901
4 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 38.1082
5 ENSMUSG00000037742 Eef1a1 eukaryotic translation elongation factor 1 alpha 1 38.0536
6 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 33.5118
7 ENSMUSG00000040952 Rps19 ribosomal protein S19 32.4942
8 ENSMUSG00000064337 mt-Rnr1 mitochondrially encoded 12S rRNA 31.7149
9 ENSMUSG00000030744 Rps3 ribosomal protein S3 31.3029
10 ENSMUSG00000023944 Hsp90ab1 heat shock protein 90 alpha (cytosolic), class B member 1 29.9330

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54189 ENSMUSG00000116978 Gm49765 predicted gene, 49765 -0.0875
54188 ENSMUSG00000116977 Gm49637 predicted gene, 49637 -0.0875
54187 ENSMUSG00000116976 4930500H12Rik RIKEN cDNA 4930500H12 gene -0.0875
54186 ENSMUSG00000116975 4930470H14Rik RIKEN cDNA 4930470H14 gene -0.0875
54185 ENSMUSG00000116974 Gm49761 predicted gene, 49761 -0.0875
54184 ENSMUSG00000116973 AV205837 expressed sequence AV205837 -0.0875
54183 ENSMUSG00000116972 Gm6278 predicted gene 6278 -0.0875
54182 ENSMUSG00000116971 Gm49766 predicted gene, 49766 -0.0875
54181 ENSMUSG00000116970 Gm49796 predicted gene, 49796 -0.0875
54180 ENSMUSG00000116969 Gm19771 predicted gene, 19771 -0.0875

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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