Human Omics database for
the Generation of iPS and Normal Cells
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Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1297624
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1297624
Profile download
6000007000000000000000-803
Sequence Read Archive
SRP034712
SRP034712_T1
Characterization of differentiating adipose cells by high-throughput single-cell
Transcriptome
Adipose Derived Stem Cell
Human
Adipose tissue
RNA-seq
HiSeq 2000
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000089009
RPL6
ribosomal protein L6
205.2444
2
ENSG00000198695
MT-ND6
mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6
59.0074
3
ENSG00000108821
COL1A1
collagen type I alpha 1 chain
46.9848
4
ENSG00000269968
novel transcript, antisense to GAPDH
43.5860
5
ENSG00000245970
novel transcript
27.0782
6
ENSG00000152348
ATG10
autophagy related 10
25.6917
7
ENSG00000259627
novel transcript, antisense to TPM1
24.7657
8
ENSG00000270641
TSIX
TSIX transcript, XIST antisense RNA
22.5878
9
ENSG00000131238
PPT1
palmitoyl-protein thioesterase 1
22.0860
10
ENSG00000132763
MMACHC
metabolism of cobalamin associated C
20.4254
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285681
novel transcript, antisense to MC4R
-0.0555
58502
ENSG00000285680
novel transcript, antisense to SLITRK1
-0.0555
58501
ENSG00000285675
novel transcript
-0.0555
58500
ENSG00000285674
NA
-0.0555
58499
ENSG00000285673
novel transcript
-0.0555
58498
ENSG00000285672
novel transcript
-0.0555
58497
ENSG00000285671
novel transcript
-0.0555
58496
ENSG00000285670
novel transcript
-0.0555
58495
ENSG00000285669
novel transcript
-0.0555
58494
ENSG00000285668
novel transcript
-0.0555
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
download
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