Human Omics database for
the Generation of iPS and Normal Cells
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Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1297626
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1297626
Profile download
6000007000000000000000-803
Sequence Read Archive
SRP034712
SRP034712_T3
Characterization of differentiating adipose cells by high-throughput single-cell
Transcriptome
Adipose Derived Stem Cell
Human
Adipose tissue
RNA-seq
HiSeq 2000
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000089009
RPL6
ribosomal protein L6
215.0878
2
ENSG00000108821
COL1A1
collagen type I alpha 1 chain
45.0731
3
ENSG00000269968
novel transcript, antisense to GAPDH
38.0460
4
ENSG00000198695
MT-ND6
mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6
36.0944
5
ENSG00000157734
SNX22
sorting nexin 22
27.7944
6
ENSG00000245970
novel transcript
27.1720
7
ENSG00000132763
MMACHC
metabolism of cobalamin associated C
20.9620
8
ENSG00000158062
UBXN11
UBX domain protein 11
19.4522
9
ENSG00000152348
ATG10
autophagy related 10
18.8077
10
ENSG00000218537
MIF-AS1
MIF antisense RNA 1
17.5809
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285700
novel transcript
-0.0391
58502
ENSG00000285699
novel transcript
-0.0391
58501
ENSG00000285698
Novel transcript
-0.0391
58500
ENSG00000285697
chromosome 22 open reading frame 42 (C22orf42) pseudogene
-0.0391
58499
ENSG00000285695
novel transcript
-0.0391
58498
ENSG00000285694
novel transcript
-0.0391
58497
ENSG00000285693
Novel transcript
-0.0391
58496
ENSG00000285692
Novel transcript, antisense to ATF7
-0.0391
58495
ENSG00000285691
novel transcript, antisense to TRDN
-0.0391
58494
ENSG00000285690
G protein-coupled receptor kinase 3 (GRK3) pseudogene
-0.0391
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
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