SHOGoiN Cell Transcriptome: GSM1297627

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1297627


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6000007000000000000000-803Sequence Read ArchiveSRP034712SRP034712_T4Characterization of differentiating adipose cells by high-throughput single-cell TranscriptomeAdipose Derived Stem CellHumanAdipose tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000089009 RPL6 ribosomal protein L6 201.8798
2 ENSG00000167995 BEST1 bestrophin 1 78.2893
3 ENSG00000180139 ACTA2-AS1 ACTA2 antisense RNA 1 55.2856
4 ENSG00000198695 MT-ND6 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6 51.4973
5 ENSG00000269968 novel transcript, antisense to GAPDH 30.9817
6 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 29.6455
7 ENSG00000270641 TSIX TSIX transcript, XIST antisense RNA 20.9964
8 ENSG00000152348 ATG10 autophagy related 10 19.3096
9 ENSG00000245970 novel transcript 17.5332
10 ENSG00000132763 MMACHC metabolism of cobalamin associated C 17.0418

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285699 novel transcript -0.0363
58502 ENSG00000285698 Novel transcript -0.0363
58501 ENSG00000285697 chromosome 22 open reading frame 42 (C22orf42) pseudogene -0.0363
58500 ENSG00000285695 novel transcript -0.0363
58499 ENSG00000285694 novel transcript -0.0363
58498 ENSG00000285693 Novel transcript -0.0363
58497 ENSG00000285690 G protein-coupled receptor kinase 3 (GRK3) pseudogene -0.0363
58496 ENSG00000285689 novel transcript -0.0363
58495 ENSG00000285687 Putative protein FAM90A22P -0.0363
58494 ENSG00000285686 LINC02834 long intergenic non-protein coding RNA 2834 -0.0363

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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