Human Omics database for
the Generation of iPS and Normal Cells
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Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1297628
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1297628
Profile download
6000007000000000000000-803
Sequence Read Archive
SRP034712
SRP034712_T5
Characterization of differentiating adipose cells by high-throughput single-cell
Transcriptome
Adipose Derived Stem Cell
Human
Adipose tissue
RNA-seq
HiSeq 2000
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000089009
RPL6
ribosomal protein L6
213.3786
2
ENSG00000167995
BEST1
bestrophin 1
73.1736
3
ENSG00000108821
COL1A1
collagen type I alpha 1 chain
33.5907
4
ENSG00000180139
ACTA2-AS1
ACTA2 antisense RNA 1
32.6408
5
ENSG00000269968
novel transcript, antisense to GAPDH
29.7944
6
ENSG00000198695
MT-ND6
mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6
26.6374
7
ENSG00000270641
TSIX
TSIX transcript, XIST antisense RNA
25.2818
8
ENSG00000245532
NEAT1
nuclear paraspeckle assembly transcript 1
21.6269
9
ENSG00000245970
novel transcript
14.9319
10
ENSG00000157734
SNX22
sorting nexin 22
14.2095
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285704
novel transcript, antisense to WNK1
-0.0320
58502
ENSG00000285703
novel transcript
-0.0320
58501
ENSG00000285702
novel transcript
-0.0320
58500
ENSG00000285701
novel transcript, antisense to CTNNBIP1
-0.0320
58499
ENSG00000285700
novel transcript
-0.0320
58498
ENSG00000285699
novel transcript
-0.0320
58497
ENSG00000285698
Novel transcript
-0.0320
58496
ENSG00000285697
chromosome 22 open reading frame 42 (C22orf42) pseudogene
-0.0320
58495
ENSG00000285696
novel transcript, antisense to ACAT1
-0.0320
58494
ENSG00000285695
novel transcript
-0.0320
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
download
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