SHOGoiN Cell Transcriptome: GSM1297628
| Expression Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1297628 Profile download | 6000007000000000000000-803 | Sequence Read Archive | SRP034712 | SRP034712_T5 | Characterization of differentiating adipose cells by high-throughput single-cell | Transcriptome | Adipose Derived Stem Cell | Human | Adipose tissue | RNA-seq | HiSeq 2000 | Sequence |
Histogram (Expression count)
Top 10 up-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 1 | ENSG00000089009 | RPL6 | ribosomal protein L6 | 213.3786 |
| 2 | ENSG00000167995 | BEST1 | bestrophin 1 | 73.1736 |
| 3 | ENSG00000108821 | COL1A1 | collagen type I alpha 1 chain | 33.5907 |
| 4 | ENSG00000180139 | ACTA2-AS1 | ACTA2 antisense RNA 1 | 32.6408 |
| 5 | ENSG00000269968 | novel transcript, antisense to GAPDH | 29.7944 | |
| 6 | ENSG00000198695 | MT-ND6 | mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6 | 26.6374 |
| 7 | ENSG00000270641 | TSIX | TSIX transcript, XIST antisense RNA | 25.2818 |
| 8 | ENSG00000245532 | NEAT1 | nuclear paraspeckle assembly transcript 1 | 21.6269 |
| 9 | ENSG00000245970 | novel transcript | 14.9319 | |
| 10 | ENSG00000157734 | SNX22 | sorting nexin 22 | 14.2095 |
Bottom 10 down-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 58735 | ENSG00000285994 | novel transcript, sense intronic to CAMK1D | -0.0320 | |
| 58734 | ENSG00000285993 | novel transcript, antisense to RNF165 | -0.0320 | |
| 58733 | ENSG00000285992 | novel transcript | -0.0320 | |
| 58732 | ENSG00000285990 | neurobeachin (NBEA) pseudogene | -0.0320 | |
| 58731 | ENSG00000285989 | TEC | -0.0320 | |
| 58730 | ENSG00000285988 | novel transcript, LINP1-LINC00707 readthrough | -0.0320 | |
| 58729 | ENSG00000285987 | NA | -0.0320 | |
| 58728 | ENSG00000285986 | complement factor H related 3 (CFHR3) pseudogene | -0.0320 | |
| 58727 | ENSG00000285985 | NA | -0.0320 | |
| 58726 | ENSG00000285984 | novel transcript | -0.0320 |
