SHOGoiN Cell Transcriptome: GSM1297629
| Expression Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1297629 Profile download | 6000007000000000000000-803 | Sequence Read Archive | SRP034712 | SRP034712_T6 | Characterization of differentiating adipose cells by high-throughput single-cell | Transcriptome | Adipose Derived Stem Cell | Human | Adipose tissue | RNA-seq | HiSeq 2000 | Sequence |
Histogram (Expression count)
Top 10 up-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 1 | ENSG00000089009 | RPL6 | ribosomal protein L6 | 215.1196 |
| 2 | ENSG00000167995 | BEST1 | bestrophin 1 | 57.6427 |
| 3 | ENSG00000180139 | ACTA2-AS1 | ACTA2 antisense RNA 1 | 49.9906 |
| 4 | ENSG00000198695 | MT-ND6 | mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6 | 28.1980 |
| 5 | ENSG00000269968 | novel transcript, antisense to GAPDH | 26.2891 | |
| 6 | ENSG00000108821 | COL1A1 | collagen type I alpha 1 chain | 22.3229 |
| 7 | ENSG00000270641 | TSIX | TSIX transcript, XIST antisense RNA | 19.1876 |
| 8 | ENSG00000157734 | SNX22 | sorting nexin 22 | 19.0128 |
| 9 | ENSG00000245970 | novel transcript | 16.7281 | |
| 10 | ENSG00000221792 | MIR1282 | microRNA 1282 | 14.8456 |
Bottom 10 down-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 58503 | ENSG00000285691 | novel transcript, antisense to TRDN | -0.0466 | |
| 58502 | ENSG00000285690 | G protein-coupled receptor kinase 3 (GRK3) pseudogene | -0.0466 | |
| 58501 | ENSG00000285689 | novel transcript | -0.0466 | |
| 58500 | ENSG00000285688 | novel transcript | -0.0466 | |
| 58499 | ENSG00000285687 | Putative protein FAM90A22P | -0.0466 | |
| 58498 | ENSG00000285686 | LINC02834 | long intergenic non-protein coding RNA 2834 | -0.0466 |
| 58497 | ENSG00000285685 | Novel trancript | -0.0466 | |
| 58496 | ENSG00000285684 | novel transcript | -0.0466 | |
| 58495 | ENSG00000285683 | Novel transcript | -0.0466 | |
| 58494 | ENSG00000285681 | novel transcript, antisense to MC4R | -0.0466 |
