Human Omics database for
the Generation of iPS and Normal Cells
Release notes
Statistics
Document manuals
FAQ
All Modules
Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1297632
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1297632
Profile download
6000007000000000000000-803
Sequence Read Archive
SRP034712
SRP034712_T9
Characterization of differentiating adipose cells by high-throughput single-cell
Transcriptome
Adipose Derived Stem Cell
Human
Adipose tissue
RNA-seq
HiSeq 2000
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000167995
BEST1
bestrophin 1
148.1481
2
ENSG00000089009
RPL6
ribosomal protein L6
121.5050
3
ENSG00000198695
MT-ND6
mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6
86.9150
4
ENSG00000269968
novel transcript, antisense to GAPDH
46.1257
5
ENSG00000245970
novel transcript
42.0472
6
ENSG00000108821
COL1A1
collagen type I alpha 1 chain
31.1791
7
ENSG00000152348
ATG10
autophagy related 10
26.7646
8
ENSG00000221792
MIR1282
microRNA 1282
25.6960
9
ENSG00000157734
SNX22
sorting nexin 22
23.2951
10
ENSG00000279605
TEC
20.2153
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285735
LINC02717
long intergenic non-protein coding RNA 2717
-0.0394
58502
ENSG00000285734
novel transcript, antisense to CACNA1C
-0.0394
58501
ENSG00000285733
novel protein
-0.0394
58500
ENSG00000285732
novel transcript, antisense to ABCD2
-0.0394
58499
ENSG00000285731
Novel transcript, antisense to TBC1D5
-0.0394
58498
ENSG00000285730
novel transcript
-0.0394
58497
ENSG00000285729
novel transcript
-0.0394
58496
ENSG00000285728
novel transcript, antisense to PPIH
-0.0394
58495
ENSG00000285727
novel transcript
-0.0394
58494
ENSG00000285726
novel transcript
-0.0394
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
download
Now loading...