Human Omics database for
the Generation of iPS and Normal Cells
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Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1297633
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1297633
Profile download
6000007000000000000000-803
Sequence Read Archive
SRP034712
SRP034712_T10
Characterization of differentiating adipose cells by high-throughput single-cell
Transcriptome
Adipose Derived Stem Cell
Human
Adipose tissue
RNA-seq
HiSeq 2000
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000167995
BEST1
bestrophin 1
89.4299
2
ENSG00000115896
PLCL1
phospholipase C like 1 (inactive)
84.4917
3
ENSG00000270641
TSIX
TSIX transcript, XIST antisense RNA
75.6947
4
ENSG00000146197
SCUBE3
signal peptide, CUB domain and EGF like domain containing 3
66.5379
5
ENSG00000179818
PCBP1-AS1
PCBP1 antisense RNA 1
54.7430
6
ENSG00000245970
novel transcript
48.0117
7
ENSG00000124151
NCOA3
nuclear receptor coactivator 3
42.6266
8
ENSG00000089009
RPL6
ribosomal protein L6
38.7677
9
ENSG00000165181
SHOC1
shortage in chiasmata 1
37.0890
10
ENSG00000139263
LRIG3
leucine rich repeats and immunoglobulin like domains 3
36.3967
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285737
LINC02680
long intergenic non-protein coding RNA 2680
-0.0451
58502
ENSG00000285736
Novel transcript
-0.0451
58501
ENSG00000285735
LINC02717
long intergenic non-protein coding RNA 2717
-0.0451
58500
ENSG00000285733
novel protein
-0.0451
58499
ENSG00000285732
novel transcript, antisense to ABCD2
-0.0451
58498
ENSG00000285731
Novel transcript, antisense to TBC1D5
-0.0451
58497
ENSG00000285730
novel transcript
-0.0451
58496
ENSG00000285729
novel transcript
-0.0451
58495
ENSG00000285728
novel transcript, antisense to PPIH
-0.0451
58494
ENSG00000285727
novel transcript
-0.0451
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
download
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