Human Omics database for
the Generation of iPS and Normal Cells
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Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1297637
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1297637
Profile download
6000007000000000000000-803
Sequence Read Archive
SRP034712
SRP034712_T14
Characterization of differentiating adipose cells by high-throughput single-cell
Transcriptome
Adipose Derived Stem Cell
Human
Adipose tissue
RNA-seq
HiSeq 2000
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000089009
RPL6
ribosomal protein L6
234.6979
2
ENSG00000198695
MT-ND6
mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6
25.3624
3
ENSG00000167995
BEST1
bestrophin 1
18.0499
4
ENSG00000180139
ACTA2-AS1
ACTA2 antisense RNA 1
15.1061
5
ENSG00000108821
COL1A1
collagen type I alpha 1 chain
13.4947
6
ENSG00000210082
MT-RNR2
mitochondrially encoded 16S rRNA
13.3066
7
ENSG00000152348
ATG10
autophagy related 10
12.9050
8
ENSG00000245970
novel transcript
12.2900
9
ENSG00000182993
C12orf60
chromosome 12 open reading frame 60
11.4616
10
ENSG00000245532
NEAT1
nuclear paraspeckle assembly transcript 1
10.0200
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285713
novel transcript
-0.0230
58502
ENSG00000285712
novel transcript
-0.0230
58501
ENSG00000285711
LINC02835
long intergenic non-protein coding RNA 2835
-0.0230
58500
ENSG00000285710
novel transcript, antisense to DDX19A
-0.0230
58499
ENSG00000285709
Novel transcript
-0.0230
58498
ENSG00000285708
novel protein
-0.0230
58497
ENSG00000285707
novel transcript
-0.0230
58496
ENSG00000285705
novel transcript
-0.0230
58495
ENSG00000285704
novel transcript, antisense to WNK1
-0.0230
58494
ENSG00000285703
novel transcript
-0.0230
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
download
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