Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1297642

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1297642


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6000007000000000000000-803Sequence Read ArchiveSRP034712SRP034712_T19Characterization of differentiating adipose cells by high-throughput single-cell TranscriptomeAdipose Derived Stem CellHumanAdipose tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000089009 RPL6 ribosomal protein L6 202.8068
2 ENSG00000198695 MT-ND6 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6 63.1905
3 ENSG00000167995 BEST1 bestrophin 1 51.3569
4 ENSG00000180139 ACTA2-AS1 ACTA2 antisense RNA 1 45.1558
5 ENSG00000270641 TSIX TSIX transcript, XIST antisense RNA 32.1720
6 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 28.2274
7 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 27.2697
8 ENSG00000182993 C12orf60 chromosome 12 open reading frame 60 26.5307
9 ENSG00000152348 ATG10 autophagy related 10 21.1255
10 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 20.8587

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285675 novel transcript -0.0492
58502 ENSG00000285674 NA -0.0492
58501 ENSG00000285673 novel transcript -0.0492
58500 ENSG00000285672 novel transcript -0.0492
58499 ENSG00000285671 novel transcript -0.0492
58498 ENSG00000285670 novel transcript -0.0492
58497 ENSG00000285668 novel transcript -0.0492
58496 ENSG00000285666 novel transcript -0.0492
58495 ENSG00000285665 DNA topoisomerase I pseudogene 1 -0.0492
58494 ENSG00000285663 novel transcript -0.0492

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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