Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1297643

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1297643


Profile download
6000007000000000000000-803Sequence Read ArchiveSRP034712SRP034712_T20Characterization of differentiating adipose cells by high-throughput single-cell TranscriptomeAdipose Derived Stem CellHumanAdipose tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000089009 RPL6 ribosomal protein L6 225.3279
2 ENSG00000167995 BEST1 bestrophin 1 40.1702
3 ENSG00000270641 TSIX TSIX transcript, XIST antisense RNA 27.7527
4 ENSG00000180139 ACTA2-AS1 ACTA2 antisense RNA 1 27.7124
5 ENSG00000182993 C12orf60 chromosome 12 open reading frame 60 26.3483
6 ENSG00000198695 MT-ND6 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6 22.7036
7 ENSG00000157734 SNX22 sorting nexin 22 20.1975
8 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 18.1601
9 ENSG00000269968 novel transcript, antisense to GAPDH 16.5898
10 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 15.5655

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285688 novel transcript -0.0280
58502 ENSG00000285687 Putative protein FAM90A22P -0.0280
58501 ENSG00000285686 LINC02834 long intergenic non-protein coding RNA 2834 -0.0280
58500 ENSG00000285685 Novel trancript -0.0280
58499 ENSG00000285684 novel transcript -0.0280
58498 ENSG00000285683 Novel transcript -0.0280
58497 ENSG00000285681 novel transcript, antisense to MC4R -0.0280
58496 ENSG00000285680 novel transcript, antisense to SLITRK1 -0.0280
58495 ENSG00000285679 novel transcript -0.0280
58494 ENSG00000285675 novel transcript -0.0280

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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