Human Omics database for
the Generation of iPS and Normal Cells
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Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1297643
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1297643
Profile download
6000007000000000000000-803
Sequence Read Archive
SRP034712
SRP034712_T20
Characterization of differentiating adipose cells by high-throughput single-cell
Transcriptome
Adipose Derived Stem Cell
Human
Adipose tissue
RNA-seq
HiSeq 2000
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000089009
RPL6
ribosomal protein L6
225.3279
2
ENSG00000167995
BEST1
bestrophin 1
40.1702
3
ENSG00000270641
TSIX
TSIX transcript, XIST antisense RNA
27.7527
4
ENSG00000180139
ACTA2-AS1
ACTA2 antisense RNA 1
27.7124
5
ENSG00000182993
C12orf60
chromosome 12 open reading frame 60
26.3483
6
ENSG00000198695
MT-ND6
mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6
22.7036
7
ENSG00000157734
SNX22
sorting nexin 22
20.1975
8
ENSG00000108821
COL1A1
collagen type I alpha 1 chain
18.1601
9
ENSG00000269968
novel transcript, antisense to GAPDH
16.5898
10
ENSG00000245532
NEAT1
nuclear paraspeckle assembly transcript 1
15.5655
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285688
novel transcript
-0.0280
58502
ENSG00000285687
Putative protein FAM90A22P
-0.0280
58501
ENSG00000285686
LINC02834
long intergenic non-protein coding RNA 2834
-0.0280
58500
ENSG00000285685
Novel trancript
-0.0280
58499
ENSG00000285684
novel transcript
-0.0280
58498
ENSG00000285683
Novel transcript
-0.0280
58497
ENSG00000285681
novel transcript, antisense to MC4R
-0.0280
58496
ENSG00000285680
novel transcript, antisense to SLITRK1
-0.0280
58495
ENSG00000285679
novel transcript
-0.0280
58494
ENSG00000285675
novel transcript
-0.0280
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
download
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