Human Omics database for
the Generation of iPS and Normal Cells
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All Modules
Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1297644
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1297644
Profile download
6000007000000000000000-803
Sequence Read Archive
SRP034712
SRP034712_T21
Characterization of differentiating adipose cells by high-throughput single-cell
Transcriptome
Adipose Derived Stem Cell
Human
Adipose tissue
RNA-seq
HiSeq 2000
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000089009
RPL6
ribosomal protein L6
158.9899
2
ENSG00000270641
TSIX
TSIX transcript, XIST antisense RNA
74.8253
3
ENSG00000198695
MT-ND6
mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6
69.3853
4
ENSG00000167995
BEST1
bestrophin 1
67.0486
5
ENSG00000182993
C12orf60
chromosome 12 open reading frame 60
63.4736
6
ENSG00000180139
ACTA2-AS1
ACTA2 antisense RNA 1
54.9819
7
ENSG00000245532
NEAT1
nuclear paraspeckle assembly transcript 1
40.1879
8
ENSG00000210082
MT-RNR2
mitochondrially encoded 16S rRNA
33.3622
9
ENSG00000102466
FGF14
fibroblast growth factor 14
25.6150
10
ENSG00000152348
ATG10
autophagy related 10
25.4307
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285707
novel transcript
-0.0589
58502
ENSG00000285706
Novel transcript
-0.0589
58501
ENSG00000285705
novel transcript
-0.0589
58500
ENSG00000285704
novel transcript, antisense to WNK1
-0.0589
58499
ENSG00000285703
novel transcript
-0.0589
58498
ENSG00000285702
novel transcript
-0.0589
58497
ENSG00000285700
novel transcript
-0.0589
58496
ENSG00000285699
novel transcript
-0.0589
58495
ENSG00000285698
Novel transcript
-0.0589
58494
ENSG00000285697
chromosome 22 open reading frame 42 (C22orf42) pseudogene
-0.0589
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
download
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