Human Omics database for
the Generation of iPS and Normal Cells
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Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1297645
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1297645
Profile download
6000007000000000000000-803
Sequence Read Archive
SRP034712
SRP034712_T22
Characterization of differentiating adipose cells by high-throughput single-cell
Transcriptome
Adipose Derived Stem Cell
Human
Adipose tissue
RNA-seq
HiSeq 2000
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000089009
RPL6
ribosomal protein L6
230.8987
2
ENSG00000270641
TSIX
TSIX transcript, XIST antisense RNA
29.4367
3
ENSG00000198695
MT-ND6
mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6
26.2679
4
ENSG00000167995
BEST1
bestrophin 1
20.7538
5
ENSG00000180139
ACTA2-AS1
ACTA2 antisense RNA 1
18.9275
6
ENSG00000245532
NEAT1
nuclear paraspeckle assembly transcript 1
14.0174
7
ENSG00000210082
MT-RNR2
mitochondrially encoded 16S rRNA
13.4445
8
ENSG00000269968
novel transcript, antisense to GAPDH
11.4287
9
ENSG00000152348
ATG10
autophagy related 10
11.2914
10
ENSG00000245970
novel transcript
10.4314
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285696
novel transcript, antisense to ACAT1
-0.0297
58502
ENSG00000285695
novel transcript
-0.0297
58501
ENSG00000285692
Novel transcript, antisense to ATF7
-0.0297
58500
ENSG00000285691
novel transcript, antisense to TRDN
-0.0297
58499
ENSG00000285690
G protein-coupled receptor kinase 3 (GRK3) pseudogene
-0.0297
58498
ENSG00000285689
novel transcript
-0.0297
58497
ENSG00000285688
novel transcript
-0.0297
58496
ENSG00000285687
Putative protein FAM90A22P
-0.0297
58495
ENSG00000285686
LINC02834
long intergenic non-protein coding RNA 2834
-0.0297
58494
ENSG00000285685
Novel trancript
-0.0297
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
download
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