Human Omics database for
the Generation of iPS and Normal Cells
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Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1297646
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1297646
Profile download
6000007000000000000000-803
Sequence Read Archive
SRP034712
SRP034712_T23
Characterization of differentiating adipose cells by high-throughput single-cell
Transcriptome
Adipose Derived Stem Cell
Human
Adipose tissue
RNA-seq
HiSeq 2000
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000089009
RPL6
ribosomal protein L6
216.1957
2
ENSG00000270641
TSIX
TSIX transcript, XIST antisense RNA
45.3806
3
ENSG00000182993
C12orf60
chromosome 12 open reading frame 60
39.9868
4
ENSG00000198695
MT-ND6
mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6
35.8914
5
ENSG00000167995
BEST1
bestrophin 1
32.0659
6
ENSG00000180139
ACTA2-AS1
ACTA2 antisense RNA 1
29.6268
7
ENSG00000245532
NEAT1
nuclear paraspeckle assembly transcript 1
22.0959
8
ENSG00000210082
MT-RNR2
mitochondrially encoded 16S rRNA
22.0878
9
ENSG00000221792
MIR1282
microRNA 1282
13.6433
10
ENSG00000132763
MMACHC
metabolism of cobalamin associated C
13.1624
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285715
novel transcript, antisense to TACC2
-0.0348
58502
ENSG00000285713
novel transcript
-0.0348
58501
ENSG00000285712
novel transcript
-0.0348
58500
ENSG00000285711
LINC02835
long intergenic non-protein coding RNA 2835
-0.0348
58499
ENSG00000285710
novel transcript, antisense to DDX19A
-0.0348
58498
ENSG00000285709
Novel transcript
-0.0348
58497
ENSG00000285708
novel protein
-0.0348
58496
ENSG00000285706
Novel transcript
-0.0348
58495
ENSG00000285705
novel transcript
-0.0348
58494
ENSG00000285704
novel transcript, antisense to WNK1
-0.0348
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
download
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