Human Omics database for
the Generation of iPS and Normal Cells
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Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1297647
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1297647
Profile download
6000007000000000000000-803
Sequence Read Archive
SRP034712
SRP034712_T24
Characterization of differentiating adipose cells by high-throughput single-cell
Transcriptome
Adipose Derived Stem Cell
Human
Adipose tissue
RNA-seq
HiSeq 2500
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000089009
RPL6
ribosomal protein L6
238.2485
2
ENSG00000214595
EML6
EMAP like 6
15.2665
3
ENSG00000245532
NEAT1
nuclear paraspeckle assembly transcript 1
14.0242
4
ENSG00000117859
OSBPL9
oxysterol binding protein like 9
11.8471
5
ENSG00000103994
ZNF106
zinc finger protein 106
10.6970
6
ENSG00000215375
MYL5
myosin light chain 5
10.1866
7
ENSG00000221792
MIR1282
microRNA 1282
10.1128
8
ENSG00000073417
PDE8A
phosphodiesterase 8A
9.2333
9
ENSG00000261003
novel transcript, overlapping to FAM120B
8.6183
10
ENSG00000157734
SNX22
sorting nexin 22
8.5261
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285730
novel transcript
-0.0163
58502
ENSG00000285729
novel transcript
-0.0163
58501
ENSG00000285727
novel transcript
-0.0163
58500
ENSG00000285726
novel transcript
-0.0163
58499
ENSG00000285725
novel transcript
-0.0163
58498
ENSG00000285724
novel transcript
-0.0163
58497
ENSG00000285723
novel protein
-0.0163
58496
ENSG00000285722
novel transcript
-0.0163
58494
ENSG00000285720
Putative protein FAM90A16P/FAM90A17P
-0.0163
10
ENSG00000157734
SNX22
sorting nexin 22
8.5261
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
download
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