Human Omics database for
the Generation of iPS and Normal Cells
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Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1297649
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1297649
Profile download
6000007000000000000000-803
Sequence Read Archive
SRP034712
SRP034712_T26
Characterization of differentiating adipose cells by high-throughput single-cell
Transcriptome
Adipose Derived Stem Cell
Human
Adipose tissue
RNA-seq
HiSeq 2500
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000089009
RPL6
ribosomal protein L6
238.6557
2
ENSG00000109971
HSPA8
heat shock protein family A (Hsp70) member 8
16.8947
3
ENSG00000253092
NA
11.5679
4
ENSG00000221792
MIR1282
microRNA 1282
8.8427
5
ENSG00000143947
RPS27A
ribosomal protein S27a
8.3528
6
ENSG00000152348
ATG10
autophagy related 10
8.3290
7
ENSG00000072952
MRVI1
murine retrovirus integration site 1 homolog
8.2577
8
ENSG00000198786
MT-ND5
mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5
7.7107
9
ENSG00000164404
GDF9
growth differentiation factor 9
7.0401
10
ENSG00000198763
MT-ND2
mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2
6.7262
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285733
novel protein
-0.0179
58502
ENSG00000285732
novel transcript, antisense to ABCD2
-0.0179
58501
ENSG00000285731
Novel transcript, antisense to TBC1D5
-0.0179
58500
ENSG00000285729
novel transcript
-0.0179
58499
ENSG00000285728
novel transcript, antisense to PPIH
-0.0179
58498
ENSG00000285727
novel transcript
-0.0179
58497
ENSG00000285726
novel transcript
-0.0179
58496
ENSG00000285725
novel transcript
-0.0179
58495
ENSG00000285724
novel transcript
-0.0179
58494
ENSG00000285723
novel protein
-0.0179
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
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