Human Omics database for
the Generation of iPS and Normal Cells
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Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1297651
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1297651
Profile download
6000007000000000000000-803
Sequence Read Archive
SRP034712
SRP034712_T28
Characterization of differentiating adipose cells by high-throughput single-cell
Transcriptome
Adipose Derived Stem Cell
Human
Adipose tissue
RNA-seq
HiSeq 2500
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000089009
RPL6
ribosomal protein L6
239.7448
2
ENSG00000221792
MIR1282
microRNA 1282
18.6969
3
ENSG00000152348
ATG10
autophagy related 10
11.3683
4
ENSG00000157734
SNX22
sorting nexin 22
10.7154
5
ENSG00000164404
GDF9
growth differentiation factor 9
9.2474
6
ENSG00000143947
RPS27A
ribosomal protein S27a
8.4940
7
ENSG00000218537
MIF-AS1
MIF antisense RNA 1
8.4438
8
ENSG00000087086
FTL
ferritin light chain
5.9404
9
ENSG00000150667
FSIP1
fibrous sheath interacting protein 1
5.3571
10
ENSG00000245532
NEAT1
nuclear paraspeckle assembly transcript 1
5.0441
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285718
novel transcript
-0.0129
58502
ENSG00000285717
novel transcript
-0.0129
58501
ENSG00000285716
novel transcript
-0.0129
58500
ENSG00000285715
novel transcript, antisense to TACC2
-0.0129
58499
ENSG00000285714
novel transcript
-0.0129
58498
ENSG00000285713
novel transcript
-0.0129
58497
ENSG00000285712
novel transcript
-0.0129
58496
ENSG00000285711
LINC02835
long intergenic non-protein coding RNA 2835
-0.0129
58495
ENSG00000285710
novel transcript, antisense to DDX19A
-0.0129
58494
ENSG00000285709
Novel transcript
-0.0129
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
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