Human Omics database for
the Generation of iPS and Normal Cells
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Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1297652
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1297652
Profile download
6000007000000000000000-803
Sequence Read Archive
SRP034712
SRP034712_T29
Characterization of differentiating adipose cells by high-throughput single-cell
Transcriptome
Adipose Derived Stem Cell
Human
Adipose tissue
RNA-seq
HiSeq 2500
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000089009
RPL6
ribosomal protein L6
241.9103
2
ENSG00000221792
MIR1282
microRNA 1282
5.8790
3
ENSG00000152348
ATG10
autophagy related 10
4.9541
4
ENSG00000157734
SNX22
sorting nexin 22
4.6511
5
ENSG00000143947
RPS27A
ribosomal protein S27a
4.0341
6
ENSG00000210082
MT-RNR2
mitochondrially encoded 16S rRNA
3.8613
7
ENSG00000164404
GDF9
growth differentiation factor 9
3.2504
8
ENSG00000245532
NEAT1
nuclear paraspeckle assembly transcript 1
2.4862
9
ENSG00000215375
MYL5
myosin light chain 5
2.3669
10
ENSG00000218537
MIF-AS1
MIF antisense RNA 1
2.2757
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285736
Novel transcript
-0.0073
58502
ENSG00000285735
LINC02717
long intergenic non-protein coding RNA 2717
-0.0073
58501
ENSG00000285734
novel transcript, antisense to CACNA1C
-0.0073
58500
ENSG00000285733
novel protein
-0.0073
58499
ENSG00000285732
novel transcript, antisense to ABCD2
-0.0073
58498
ENSG00000285731
Novel transcript, antisense to TBC1D5
-0.0073
58497
ENSG00000285729
novel transcript
-0.0073
58496
ENSG00000285726
novel transcript
-0.0073
58495
ENSG00000285725
novel transcript
-0.0073
58494
ENSG00000285724
novel transcript
-0.0073
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
download
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