Human Omics database for
the Generation of iPS and Normal Cells
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Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1297662
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1297662
Profile download
6000007000000000000000-803
Sequence Read Archive
SRP034712
SRP034712_T39
Characterization of differentiating adipose cells by high-throughput single-cell
Transcriptome
Adipose Derived Stem Cell
Human
Adipose tissue
RNA-seq
HiSeq 2500
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000210082
MT-RNR2
mitochondrially encoded 16S rRNA
210.3719
2
ENSG00000245532
NEAT1
nuclear paraspeckle assembly transcript 1
38.7345
3
ENSG00000150667
FSIP1
fibrous sheath interacting protein 1
33.8874
4
ENSG00000089009
RPL6
ribosomal protein L6
29.7761
5
ENSG00000273149
novel transcript, antisense to TPT1
28.9971
6
ENSG00000152348
ATG10
autophagy related 10
25.5349
7
ENSG00000234961
novel transcript
24.7559
8
ENSG00000172869
DMXL1
Dmx like 1
24.0635
9
ENSG00000115414
FN1
fibronectin 1
21.4236
10
ENSG00000115966
ATF2
activating transcription factor 2
21.1639
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285734
novel transcript, antisense to CACNA1C
-0.0419
58502
ENSG00000285733
novel protein
-0.0419
58501
ENSG00000285732
novel transcript, antisense to ABCD2
-0.0419
58500
ENSG00000285731
Novel transcript, antisense to TBC1D5
-0.0419
58499
ENSG00000285729
novel transcript
-0.0419
58498
ENSG00000285728
novel transcript, antisense to PPIH
-0.0419
58497
ENSG00000285727
novel transcript
-0.0419
58496
ENSG00000285726
novel transcript
-0.0419
58495
ENSG00000285725
novel transcript
-0.0419
58494
ENSG00000285724
novel transcript
-0.0419
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
download
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