Human Omics database for
the Generation of iPS and Normal Cells
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Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1297665
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1297665
Profile download
6000007000000000000000-803
Sequence Read Archive
SRP034712
SRP034712_T42
Characterization of differentiating adipose cells by high-throughput single-cell
Transcriptome
Adipose Derived Stem Cell
Human
Adipose tissue
RNA-seq
HiSeq 2500
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000210082
MT-RNR2
mitochondrially encoded 16S rRNA
206.9799
2
ENSG00000089009
RPL6
ribosomal protein L6
62.2247
3
ENSG00000150667
FSIP1
fibrous sheath interacting protein 1
35.8679
4
ENSG00000273149
novel transcript, antisense to TPT1
30.6795
5
ENSG00000116350
SRSF4
serine and arginine rich splicing factor 4
28.2237
6
ENSG00000245532
NEAT1
nuclear paraspeckle assembly transcript 1
26.5288
7
ENSG00000234961
novel transcript
24.0384
8
ENSG00000225855
RUSC1-AS1
RUSC1 antisense RNA 1
21.1675
9
ENSG00000221792
MIR1282
microRNA 1282
16.5672
10
ENSG00000157734
SNX22
sorting nexin 22
16.2905
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285733
novel protein
-0.0356
58502
ENSG00000285732
novel transcript, antisense to ABCD2
-0.0356
58501
ENSG00000285731
Novel transcript, antisense to TBC1D5
-0.0356
58500
ENSG00000285729
novel transcript
-0.0356
58499
ENSG00000285728
novel transcript, antisense to PPIH
-0.0356
58498
ENSG00000285727
novel transcript
-0.0356
58497
ENSG00000285726
novel transcript
-0.0356
58496
ENSG00000285725
novel transcript
-0.0356
58495
ENSG00000285724
novel transcript
-0.0356
58494
ENSG00000285723
novel protein
-0.0356
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
download
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