SHOGoiN Cell Transcriptome: GSM1617403

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1617403


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1010201000000000000000-213Sequence Read ArchiveSRP055440SRP055440_T6Single Cell Analysis Reveals Unexpected Transcriptional Heterogeneity of Neural Progenitors in the Developing Human CortexTranscriptomeRadial glia cell (Cerebral cortex)HumanBrainRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000167552 TUBA1A tubulin alpha 1a 63.0037
2 ENSG00000120738 EGR1 early growth response 1 51.8815
3 ENSG00000075624 ACTB actin beta 47.2657
4 ENSG00000184009 ACTG1 actin gamma 1 38.7451
5 ENSG00000171617 ENC1 ectodermal-neural cortex 1 35.8233
6 ENSG00000170345 FOS Fos proto-oncogene, AP-1 transcription factor subunit 33.5772
7 ENSG00000196230 TUBB tubulin beta class I 33.1634
8 ENSG00000225783 MIAT myocardial infarction associated transcript 32.4421
9 ENSG00000113657 DPYSL3 dihydropyrimidinase like 3 32.0511
10 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 31.0292

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285620 Putative protein FAM90A16P/FAM90A17P -0.2023
58502 ENSG00000285618 novel transcript, antisense to ADGRV1 -0.2023
58501 ENSG00000285616 novel transcript -0.2023
58500 ENSG00000285615 novel transcript -0.2023
58499 ENSG00000285611 Novel transcript -0.2023
58498 ENSG00000285610 novel transcript, antisense to PACRG -0.2023
58497 ENSG00000285609 NA -0.2023
58496 ENSG00000285607 Putative protein FAM90A9P -0.2023
58495 ENSG00000285605 Novel transcript, antisense to KCTD16 -0.2023
58494 ENSG00000285604 novel transcript, antisense to TNFRSF8 -0.2023

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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