SHOGoiN Cell Transcriptome: GSM1657873

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1657873


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T3A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000123560 PLP1 proteolipid protein 1 164.2589
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 71.1952
3 ENSG00000162944 RFTN2 raftlin family member 2 39.3721
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 35.8464
5 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 34.1754
6 ENSG00000164124 TMEM144 transmembrane protein 144 32.1861
7 ENSG00000124193 SRSF6 serine and arginine rich splicing factor 6 29.1194
8 ENSG00000080822 CLDND1 claudin domain containing 1 26.7629
9 ENSG00000136541 ERMN ermin 26.1202
10 ENSG00000013297 CLDN11 claudin 11 25.0123

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0533
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0533
58733 ENSG00000285992 novel transcript -0.0533
58732 ENSG00000285991 novel transcript -0.0533
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0533
58730 ENSG00000285989 TEC -0.0533
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0533
58728 ENSG00000285987 NA -0.0533
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0533
58726 ENSG00000285985 NA -0.0533

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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