SHOGoiN Cell Transcriptome: GSM1657888

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1657888


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T18A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 139.2591
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 70.9302
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 57.3093
4 ENSG00000131711 MAP1B microtubule associated protein 1B 56.1853
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 55.0216
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 37.3674
7 ENSG00000143933 CALM2 calmodulin 2 33.7175
8 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 27.8592
9 ENSG00000144369 FAM171B family with sequence similarity 171 member B 24.2358
10 ENSG00000270641 TSIX TSIX transcript, XIST antisense RNA 23.1118

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0833
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0833
58733 ENSG00000285992 novel transcript -0.0833
58732 ENSG00000285991 novel transcript -0.0833
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0833
58730 ENSG00000285989 TEC -0.0833
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0833
58728 ENSG00000285987 NA -0.0833
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0833
58726 ENSG00000285985 NA -0.0833

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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