SHOGoiN Cell Transcriptome: GSM1657915

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1657915


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T45A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 116.1966
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 52.3840
3 ENSG00000184226 PCDH9 protocadherin 9 43.9592
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 41.0560
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 37.8303
6 ENSG00000106278 PTPRZ1 protein tyrosine phosphatase, receptor type Z1 35.3067
7 ENSG00000134769 DTNA dystrobrevin alpha 32.8020
8 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 30.5060
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 29.2157
10 ENSG00000102786 INTS6 integrator complex subunit 6 28.3049

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0815
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0815
58733 ENSG00000285992 novel transcript -0.0815
58732 ENSG00000285991 novel transcript -0.0815
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0815
58730 ENSG00000285989 TEC -0.0815
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0815
58728 ENSG00000285987 NA -0.0815
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0815
58726 ENSG00000285985 NA -0.0815

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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