SHOGoiN Cell Transcriptome: GSM1657918

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1657918


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T48A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000277443 MARCKS myristoylated alanine rich protein kinase C substrate 70.0675
2 ENSG00000066654 THUMPD1 THUMP domain containing 1 60.5292
3 ENSG00000177565 TBL1XR1 transducin beta like 1 X-linked receptor 1 52.6431
4 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 47.2290
5 ENSG00000175387 SMAD2 SMAD family member 2 45.6975
6 ENSG00000014824 SLC30A9 solute carrier family 30 member 9 43.6386
7 ENSG00000106278 PTPRZ1 protein tyrosine phosphatase, receptor type Z1 43.2129
8 ENSG00000120694 HSPH1 heat shock protein family H (Hsp110) member 1 42.9333
9 ENSG00000038427 VCAN versican 40.4105
10 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 37.9449

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0621
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0621
58733 ENSG00000285992 novel transcript -0.0621
58732 ENSG00000285991 novel transcript -0.0621
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0621
58730 ENSG00000285989 TEC -0.0621
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0621
58728 ENSG00000285987 NA -0.0621
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0621
58726 ENSG00000285985 NA -0.0621

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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