SHOGoiN Cell Transcriptome: GSM1657936

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1657936


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T66A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 150.2299
2 ENSG00000130066 SAT1 spermidine/spermine N1-acetyltransferase 1 90.3033
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 54.0791
4 ENSG00000110436 SLC1A2 solute carrier family 1 member 2 48.5339
5 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 37.0519
6 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 34.4601
7 ENSG00000120694 HSPH1 heat shock protein family H (Hsp110) member 1 29.0958
8 ENSG00000143933 CALM2 calmodulin 2 25.3589
9 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 25.1630
10 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 24.3945

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0915
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0915
58733 ENSG00000285992 novel transcript -0.0915
58732 ENSG00000285991 novel transcript -0.0915
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0915
58730 ENSG00000285989 TEC -0.0915
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0915
58728 ENSG00000285987 NA -0.0915
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0915
58726 ENSG00000285985 NA -0.0915

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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