SHOGoiN Cell Transcriptome: GSM1657960

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1657960


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T90A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 66.5135
2 ENSG00000092964 DPYSL2 dihydropyrimidinase like 2 60.8922
3 ENSG00000131711 MAP1B microtubule associated protein 1B 55.5578
4 ENSG00000117632 STMN1 stathmin 1 36.6325
5 ENSG00000081189 MEF2C myocyte enhancer factor 2C 34.8366
6 ENSG00000075624 ACTB actin beta 33.9334
7 ENSG00000189241 TSPYL1 TSPY like 1 33.3808
8 ENSG00000096384 HSP90AB1 heat shock protein 90 alpha family class B member 1 33.1258
9 ENSG00000164924 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 29.8954
10 ENSG00000152583 SPARCL1 SPARC like 1 29.7254

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.1450
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.1450
58733 ENSG00000285992 novel transcript -0.1450
58732 ENSG00000285991 novel transcript -0.1450
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.1450
58730 ENSG00000285989 TEC -0.1450
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.1450
58728 ENSG00000285987 NA -0.1450
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.1450
58726 ENSG00000285985 NA -0.1450

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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