SHOGoiN Cell Transcriptome: GSM1657979

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1657979


Profile download
1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T109A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 114.1011
2 ENSG00000110436 SLC1A2 solute carrier family 1 member 2 79.0800
3 ENSG00000152583 SPARCL1 SPARC like 1 72.2577
4 ENSG00000120885 CLU clusterin 60.0554
5 ENSG00000144369 FAM171B family with sequence similarity 171 member B 58.1078
6 ENSG00000135821 GLUL glutamate-ammonia ligase 52.0093
7 ENSG00000150625 GPM6A glycoprotein M6A 40.5466
8 ENSG00000092964 DPYSL2 dihydropyrimidinase like 2 33.3732
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 29.7865
10 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 26.4286

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0727
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0727
58733 ENSG00000285992 novel transcript -0.0727
58732 ENSG00000285991 novel transcript -0.0727
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0727
58730 ENSG00000285989 TEC -0.0727
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0727
58728 ENSG00000285987 NA -0.0727
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0727
58726 ENSG00000285985 NA -0.0727

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...