SHOGoiN Cell Transcriptome: GSM1657988

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1657988


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T118A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 141.0998
2 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 40.0844
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 38.1645
4 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 33.6232
5 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 27.9005
6 ENSG00000131711 MAP1B microtubule associated protein 1B 26.7375
7 ENSG00000214548 MEG3 maternally expressed 3 24.8914
8 ENSG00000143933 CALM2 calmodulin 2 21.3655
9 ENSG00000224078 SNHG14 small nucleolar RNA host gene 14 20.2763
10 ENSG00000229807 XIST X inactive specific transcript 20.1840

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.1224
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.1224
58733 ENSG00000285992 novel transcript -0.1224
58732 ENSG00000285991 novel transcript -0.1224
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.1224
58730 ENSG00000285989 TEC -0.1224
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.1224
58728 ENSG00000285987 NA -0.1224
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.1224
58726 ENSG00000285985 NA -0.1224

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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