SHOGoiN Cell Transcriptome: GSM1657999

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1657999


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T129A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqMiSeqSequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 130.4810
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 92.7278
3 ENSG00000113369 ARRDC3 arrestin domain containing 3 56.9231
4 ENSG00000062716 VMP1 vacuole membrane protein 1 41.6770
5 ENSG00000277443 MARCKS myristoylated alanine rich protein kinase C substrate 36.7795
6 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 29.7634
7 ENSG00000173391 OLR1 oxidized low density lipoprotein receptor 1 28.6135
8 ENSG00000182141 ZNF708 zinc finger protein 708 27.6553
9 ENSG00000132475 H3F3B H3 histone family member 3B 27.5702
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 26.6758

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0580
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0580
58733 ENSG00000285992 novel transcript -0.0580
58732 ENSG00000285991 novel transcript -0.0580
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0580
58730 ENSG00000285989 TEC -0.0580
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0580
58728 ENSG00000285987 NA -0.0580
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0580
58726 ENSG00000285985 NA -0.0580

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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