SHOGoiN Cell Transcriptome: GSM1658014

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1658014


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T144A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000131711 MAP1B microtubule associated protein 1B 103.6194
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 57.5967
3 ENSG00000146469 VIP vasoactive intestinal peptide 55.9222
4 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 50.6777
5 ENSG00000092964 DPYSL2 dihydropyrimidinase like 2 49.1206
6 ENSG00000096384 HSP90AB1 heat shock protein 90 alpha family class B member 1 39.5297
7 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 37.3453
8 ENSG00000144369 FAM171B family with sequence similarity 171 member B 31.9653
9 ENSG00000198668 CALM1 calmodulin 1 31.3380
10 ENSG00000171951 SCG2 secretogranin II 29.5101

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.1382
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.1382
58733 ENSG00000285992 novel transcript -0.1382
58732 ENSG00000285991 novel transcript -0.1382
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.1382
58730 ENSG00000285989 TEC -0.1382
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.1382
58728 ENSG00000285987 NA -0.1382
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.1382
58726 ENSG00000285985 NA -0.1382

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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