SHOGoiN Cell Transcriptome: GSM1658048

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1658048


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T178A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 149.9553
2 ENSG00000110436 SLC1A2 solute carrier family 1 member 2 106.1990
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 58.5228
4 ENSG00000144369 FAM171B family with sequence similarity 171 member B 40.6381
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 38.9918
6 ENSG00000130066 SAT1 spermidine/spermine N1-acetyltransferase 1 37.2376
7 ENSG00000152583 SPARCL1 SPARC like 1 30.5639
8 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 21.5677
9 ENSG00000008311 AASS aminoadipate-semialdehyde synthase 20.5681
10 ENSG00000143933 CALM2 calmodulin 2 18.2259

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0802
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0802
58733 ENSG00000285992 novel transcript -0.0802
58732 ENSG00000285991 novel transcript -0.0802
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0802
58730 ENSG00000285989 TEC -0.0802
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0802
58728 ENSG00000285987 NA -0.0802
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0802
58726 ENSG00000285985 NA -0.0802

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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