SHOGoiN Cell Transcriptome: GSM1658084

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1658084


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T214A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 135.7728
2 ENSG00000131711 MAP1B microtubule associated protein 1B 94.9476
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 48.6535
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 47.9667
5 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 33.6461
6 ENSG00000117632 STMN1 stathmin 1 33.1373
7 ENSG00000132639 SNAP25 synaptosome associated protein 25 30.1613
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 29.1693
9 ENSG00000189241 TSPYL1 TSPY like 1 29.0930
10 ENSG00000145335 SNCA synuclein alpha 28.3044

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.1079
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.1079
58733 ENSG00000285992 novel transcript -0.1079
58732 ENSG00000285991 novel transcript -0.1079
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.1079
58730 ENSG00000285989 TEC -0.1079
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.1079
58728 ENSG00000285987 NA -0.1079
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.1079
58726 ENSG00000285985 NA -0.1079

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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