SHOGoiN Cell Transcriptome: GSM1658104

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1658104


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T234A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 118.7732
2 ENSG00000120738 EGR1 early growth response 1 37.1044
3 ENSG00000170540 ARL6IP1 ADP ribosylation factor like GTPase 6 interacting protein 1 36.2942
4 ENSG00000143933 CALM2 calmodulin 2 33.8896
5 ENSG00000131711 MAP1B microtubule associated protein 1B 32.4493
6 ENSG00000005810 MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase 30.8419
7 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 29.3888
8 ENSG00000123983 ACSL3 acyl-CoA synthetase long chain family member 3 26.7270
9 ENSG00000100852 ARHGAP5 Rho GTPase activating protein 5 25.2610
10 ENSG00000152795 HNRNPDL heterogeneous nuclear ribonucleoprotein D like 24.1423

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0973
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0973
58733 ENSG00000285992 novel transcript -0.0973
58732 ENSG00000285991 novel transcript -0.0973
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0973
58730 ENSG00000285989 TEC -0.0973
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0973
58728 ENSG00000285987 NA -0.0973
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0973
58726 ENSG00000285985 NA -0.0973

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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