SHOGoiN Cell Transcriptome: GSM1658127

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1658127


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T257A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 122.1800
2 ENSG00000131711 MAP1B microtubule associated protein 1B 61.8236
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 54.4955
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 54.0316
5 ENSG00000189056 RELN reelin 37.9995
6 ENSG00000114279 FGF12 fibroblast growth factor 12 34.3354
7 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 28.9707
8 ENSG00000145824 CXCL14 C-X-C motif chemokine ligand 14 28.3832
9 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 27.9504
10 ENSG00000096384 HSP90AB1 heat shock protein 90 alpha family class B member 1 27.3474

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285739 novel transcript, antisense to NRG3 -0.1253
58502 ENSG00000285738 Novel transcript -0.1253
58501 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.1253
58500 ENSG00000285736 Novel transcript -0.1253
58499 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.1253
58498 ENSG00000285734 novel transcript, antisense to CACNA1C -0.1253
58497 ENSG00000285733 novel protein -0.1253
58496 ENSG00000285732 novel transcript, antisense to ABCD2 -0.1253
58495 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.1253
58494 ENSG00000285730 novel transcript -0.1253

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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