SHOGoiN Cell Transcriptome: GSM1658131

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1658131


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T261A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 128.0105
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 97.4837
3 ENSG00000106278 PTPRZ1 protein tyrosine phosphatase, receptor type Z1 35.0360
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 34.8903
5 ENSG00000196376 SLC35F1 solute carrier family 35 member F1 26.6499
6 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 26.3794
7 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 26.1505
8 ENSG00000214548 MEG3 maternally expressed 3 24.8812
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 24.5690
10 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 22.0928

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285993 novel transcript, antisense to RNF165 -0.1312
58734 ENSG00000285992 novel transcript -0.1312
58733 ENSG00000285991 novel transcript -0.1312
58732 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.1312
58731 ENSG00000285989 TEC -0.1312
58730 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.1312
58729 ENSG00000285987 NA -0.1312
58728 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.1312
58727 ENSG00000285985 NA -0.1312
58726 ENSG00000285984 novel transcript -0.1312

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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