SHOGoiN Cell Transcriptome: GSM1658151

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type


Profile download
1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T281A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 140.1586
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 93.0690
3 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 69.6859
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 58.3015
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 33.6571
6 ENSG00000270641 TSIX TSIX transcript, XIST antisense RNA 31.6196
7 ENSG00000229807 XIST X inactive specific transcript 30.5523
8 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 27.9649
9 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 26.3802
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 26.2508

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0754
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0754
58733 ENSG00000285992 novel transcript -0.0754
58732 ENSG00000285991 novel transcript -0.0754
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0754
58730 ENSG00000285989 TEC -0.0754
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0754
58728 ENSG00000285987 NA -0.0754
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0754
58726 ENSG00000285985 NA -0.0754

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...