SHOGoiN Cell Transcriptome: GSM1677473
| Expression Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1677473 Profile download | 7000000000000000000000-766 | Sequence Read Archive | SRP050499 | SRP050499_T1 | The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ Cells | Transcriptome | Primordial germ cell | Human | Early embryonic tissue | RNA-seq | HiSeq 2500 | Sequence |
Histogram (Expression count)
Top 10 up-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 1 | ENSG00000156508 | EEF1A1 | eukaryotic translation elongation factor 1 alpha 1 | 136.8552 |
| 2 | ENSG00000133112 | TPT1 | tumor protein, translationally-controlled 1 | 98.9310 |
| 3 | ENSG00000273149 | novel transcript, antisense to TPT1 | 57.1964 | |
| 4 | ENSG00000198786 | MT-ND5 | mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 | 32.7327 |
| 5 | ENSG00000196230 | TUBB | tubulin beta class I | 30.4824 |
| 6 | ENSG00000198804 | MT-CO1 | mitochondrially encoded cytochrome c oxidase I | 29.1847 |
| 7 | ENSG00000184009 | ACTG1 | actin gamma 1 | 28.7429 |
| 8 | ENSG00000089157 | RPLP0 | ribosomal protein lateral stalk subunit P0 | 26.5340 |
| 9 | ENSG00000174444 | RPL4 | ribosomal protein L4 | 26.4512 |
| 10 | ENSG00000148303 | RPL7A | ribosomal protein L7a | 24.0352 |
Bottom 10 down-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 58735 | ENSG00000285994 | novel transcript, sense intronic to CAMK1D | -0.0972 | |
| 58734 | ENSG00000285993 | novel transcript, antisense to RNF165 | -0.0972 | |
| 58733 | ENSG00000285992 | novel transcript | -0.0972 | |
| 58732 | ENSG00000285991 | novel transcript | -0.0972 | |
| 58731 | ENSG00000285990 | neurobeachin (NBEA) pseudogene | -0.0972 | |
| 58730 | ENSG00000285989 | TEC | -0.0972 | |
| 58729 | ENSG00000285988 | novel transcript, LINP1-LINC00707 readthrough | -0.0972 | |
| 58728 | ENSG00000285987 | NA | -0.0972 | |
| 58727 | ENSG00000285986 | complement factor H related 3 (CFHR3) pseudogene | -0.0972 | |
| 58726 | ENSG00000285985 | NA | -0.0972 |
