Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1677475

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677475


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T3The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 125.2165
2 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 74.4797
3 ENSG00000196230 TUBB tubulin beta class I 42.7439
4 ENSG00000273149 novel transcript, antisense to TPT1 41.2562
5 ENSG00000089157 RPLP0 ribosomal protein lateral stalk subunit P0 39.7912
6 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 32.1615
7 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 30.7189
8 ENSG00000184009 ACTG1 actin gamma 1 28.4312
9 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 27.5634
10 ENSG00000168028 RPSA ribosomal protein SA 26.3012

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285742 novel transcript -0.1153
58502 ENSG00000285741 novel transcript -0.1153
58501 ENSG00000285740 novel transcript -0.1153
58500 ENSG00000285739 novel transcript, antisense to NRG3 -0.1153
58499 ENSG00000285738 Novel transcript -0.1153
58498 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.1153
58497 ENSG00000285736 Novel transcript -0.1153
58496 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.1153
58495 ENSG00000285734 novel transcript, antisense to CACNA1C -0.1153
58494 ENSG00000285733 novel protein -0.1153

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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