Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1677478

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677478


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T6The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 110.9620
2 ENSG00000196230 TUBB tubulin beta class I 68.6392
3 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 47.1870
4 ENSG00000089157 RPLP0 ribosomal protein lateral stalk subunit P0 31.4861
5 ENSG00000168028 RPSA ribosomal protein SA 30.0707
6 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 29.9868
7 ENSG00000148303 RPL7A ribosomal protein L7a 28.4275
8 ENSG00000137154 RPS6 ribosomal protein S6 28.2116
9 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 27.7978
10 ENSG00000070756 PABPC1 poly(A) binding protein cytoplasmic 1 26.5323

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.1255
58502 ENSG00000285742 novel transcript -0.1255
58501 ENSG00000285741 novel transcript -0.1255
58500 ENSG00000285740 novel transcript -0.1255
58499 ENSG00000285739 novel transcript, antisense to NRG3 -0.1255
58498 ENSG00000285738 Novel transcript -0.1255
58497 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.1255
58496 ENSG00000285736 Novel transcript -0.1255
58495 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.1255
58494 ENSG00000285734 novel transcript, antisense to CACNA1C -0.1255

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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