SHOGoiN Cell Transcriptome: GSM1677482

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677482


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T10The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 113.3261
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 93.2718
3 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 78.1587
4 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 47.4507
5 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 43.0235
6 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 35.7690
7 ENSG00000184009 ACTG1 actin gamma 1 33.5778
8 ENSG00000196230 TUBB tubulin beta class I 32.7489
9 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 32.3377
10 ENSG00000109971 HSPA8 heat shock protein family A (Hsp70) member 8 28.9642

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285736 Novel transcript -0.1052
58502 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.1052
58501 ENSG00000285734 novel transcript, antisense to CACNA1C -0.1052
58500 ENSG00000285733 novel protein -0.1052
58499 ENSG00000285732 novel transcript, antisense to ABCD2 -0.1052
58498 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.1052
58497 ENSG00000285730 novel transcript -0.1052
58496 ENSG00000285729 novel transcript -0.1052
58495 ENSG00000285728 novel transcript, antisense to PPIH -0.1052
58494 ENSG00000285727 novel transcript -0.1052

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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