Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1677485

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677485


Profile download
7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T13The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 203.2443
2 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 38.5305
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 38.3530
4 ENSG00000174444 RPL4 ribosomal protein L4 35.9627
5 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 34.8109
6 ENSG00000184009 ACTG1 actin gamma 1 32.3929
7 ENSG00000168028 RPSA ribosomal protein SA 27.7029
8 ENSG00000089157 RPLP0 ribosomal protein lateral stalk subunit P0 23.1391
9 ENSG00000100316 RPL3 ribosomal protein L3 22.7092
10 ENSG00000137154 RPS6 ribosomal protein S6 22.1767

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285740 novel transcript -0.0584
58502 ENSG00000285739 novel transcript, antisense to NRG3 -0.0584
58501 ENSG00000285738 Novel transcript -0.0584
58500 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0584
58499 ENSG00000285736 Novel transcript -0.0584
58498 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0584
58497 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0584
58496 ENSG00000285733 novel protein -0.0584
58495 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0584
58494 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0584

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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