Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1677490

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677490


Profile download
7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T18The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 156.1415
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 69.4192
3 ENSG00000174444 RPL4 ribosomal protein L4 46.3880
4 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 45.7850
5 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 45.2558
6 ENSG00000184009 ACTG1 actin gamma 1 38.4874
7 ENSG00000089157 RPLP0 ribosomal protein lateral stalk subunit P0 34.1125
8 ENSG00000168028 RPSA ribosomal protein SA 30.7837
9 ENSG00000122406 RPL5 ribosomal protein L5 27.8302
10 ENSG00000148303 RPL7A ribosomal protein L7a 26.4272

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0928
58502 ENSG00000285736 Novel transcript -0.0928
58501 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0928
58500 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0928
58499 ENSG00000285733 novel protein -0.0928
58498 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0928
58497 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0928
58496 ENSG00000285729 novel transcript -0.0928
58495 ENSG00000285728 novel transcript, antisense to PPIH -0.0928
58494 ENSG00000285727 novel transcript -0.0928

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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