Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1677496

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677496


Profile download
7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T24The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 200.7554
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 52.6315
3 ENSG00000174444 RPL4 ribosomal protein L4 38.0055
4 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 33.4376
5 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 32.7997
6 ENSG00000089157 RPLP0 ribosomal protein lateral stalk subunit P0 32.7466
7 ENSG00000168028 RPSA ribosomal protein SA 27.5284
8 ENSG00000196230 TUBB tubulin beta class I 22.1444
9 ENSG00000137154 RPS6 ribosomal protein S6 20.8031
10 ENSG00000142541 RPL13A ribosomal protein L13a 19.9277

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285742 novel transcript -0.0635
58502 ENSG00000285741 novel transcript -0.0635
58501 ENSG00000285740 novel transcript -0.0635
58500 ENSG00000285739 novel transcript, antisense to NRG3 -0.0635
58499 ENSG00000285738 Novel transcript -0.0635
58498 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0635
58497 ENSG00000285736 Novel transcript -0.0635
58496 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0635
58495 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0635
58494 ENSG00000285733 novel protein -0.0635

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...