Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1677497

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677497


Profile download
7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T25The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 202.6471
2 ENSG00000174444 RPL4 ribosomal protein L4 48.1693
3 ENSG00000089157 RPLP0 ribosomal protein lateral stalk subunit P0 45.8852
4 ENSG00000168028 RPSA ribosomal protein SA 33.3991
5 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 30.3281
6 ENSG00000137154 RPS6 ribosomal protein S6 28.5697
7 ENSG00000204628 RACK1 receptor for activated C kinase 1 27.2988
8 ENSG00000142541 RPL13A ribosomal protein L13a 25.6484
9 ENSG00000122406 RPL5 ribosomal protein L5 22.3162
10 ENSG00000196230 TUBB tubulin beta class I 21.1045

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0584
58502 ENSG00000285736 Novel transcript -0.0584
58501 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0584
58500 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0584
58499 ENSG00000285733 novel protein -0.0584
58498 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0584
58497 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0584
58496 ENSG00000285730 novel transcript -0.0584
58495 ENSG00000285729 novel transcript -0.0584
58494 ENSG00000285727 novel transcript -0.0584

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...