Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1677499

Expression Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Expression Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM1677499 Profile download	7000000000000000000000-766	Sequence Read Archive	SRP050499	SRP050499_T27	The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ Cells	Transcriptome	Primordial germ cell	Human	Early embryonic tissue	RNA-seq	HiSeq 2500	Sequence

Histogram (Expression count)

Top 10 up-regulated genes

Rank	ENSG	Gene symbol	Description	Z-score
1	ENSG00000156508	EEF1A1	eukaryotic translation elongation factor 1 alpha 1	184.0435
2	ENSG00000198886	MT-ND4	mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4	59.1074
3	ENSG00000089157	RPLP0	ribosomal protein lateral stalk subunit P0	43.6075
4	ENSG00000133112	TPT1	tumor protein, translationally-controlled 1	39.8115
5	ENSG00000174444	RPL4	ribosomal protein L4	39.3948
6	ENSG00000168028	RPSA	ribosomal protein SA	36.8099
7	ENSG00000198804	MT-CO1	mitochondrially encoded cytochrome c oxidase I	33.0920
8	ENSG00000196230	TUBB	tubulin beta class I	32.4018
9	ENSG00000137154	RPS6	ribosomal protein S6	30.4094
10	ENSG00000204628	RACK1	receptor for activated C kinase 1	28.9997

Bottom 10 down-regulated genes

Rank	ENSG	Gene symbol	Description	Z-score
58503	ENSG00000285738		Novel transcript	-0.0693
58502	ENSG00000285737	LINC02680	long intergenic non-protein coding RNA 2680	-0.0693
58501	ENSG00000285736		Novel transcript	-0.0693
58500	ENSG00000285735	LINC02717	long intergenic non-protein coding RNA 2717	-0.0693
58499	ENSG00000285734		novel transcript, antisense to CACNA1C	-0.0693
58498	ENSG00000285733		novel protein	-0.0693
58497	ENSG00000285732		novel transcript, antisense to ABCD2	-0.0693
58496	ENSG00000285731		Novel transcript, antisense to TBC1D5	-0.0693
58495	ENSG00000285730		novel transcript	-0.0693
58494	ENSG00000285729		novel transcript	-0.0693

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	Z-score

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