Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1677524

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677524


Profile download
7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T52The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 123.9004
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 117.7055
3 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 63.2655
4 ENSG00000174444 RPL4 ribosomal protein L4 44.4263
5 ENSG00000089157 RPLP0 ribosomal protein lateral stalk subunit P0 38.3624
6 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 35.7385
7 ENSG00000184009 ACTG1 actin gamma 1 34.1290
8 ENSG00000109971 HSPA8 heat shock protein family A (Hsp70) member 8 32.7927
9 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 30.7040
10 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 29.7121

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0907
58502 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0907
58501 ENSG00000285730 novel transcript -0.0907
58500 ENSG00000285729 novel transcript -0.0907
58499 ENSG00000285728 novel transcript, antisense to PPIH -0.0907
58498 ENSG00000285727 novel transcript -0.0907
58497 ENSG00000285726 novel transcript -0.0907
58496 ENSG00000285725 novel transcript -0.0907
58495 ENSG00000285724 novel transcript -0.0907
58494 ENSG00000285723 novel protein -0.0907

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...