Human Omics database for
the Generation of iPS and Normal Cells
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Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1677524
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1677524
Profile download
7000000000000000000000-766
Sequence Read Archive
SRP050499
SRP050499_T52
The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ Cells
Transcriptome
Primordial germ cell
Human
Early embryonic tissue
RNA-seq
HiSeq 2500
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000156508
EEF1A1
eukaryotic translation elongation factor 1 alpha 1
123.9004
2
ENSG00000198804
MT-CO1
mitochondrially encoded cytochrome c oxidase I
117.7055
3
ENSG00000198886
MT-ND4
mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4
63.2655
4
ENSG00000174444
RPL4
ribosomal protein L4
44.4263
5
ENSG00000089157
RPLP0
ribosomal protein lateral stalk subunit P0
38.3624
6
ENSG00000133112
TPT1
tumor protein, translationally-controlled 1
35.7385
7
ENSG00000184009
ACTG1
actin gamma 1
34.1290
8
ENSG00000109971
HSPA8
heat shock protein family A (Hsp70) member 8
32.7927
9
ENSG00000198888
MT-ND1
mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1
30.7040
10
ENSG00000080824
HSP90AA1
heat shock protein 90 alpha family class A member 1
29.7121
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285732
novel transcript, antisense to ABCD2
-0.0907
58502
ENSG00000285731
Novel transcript, antisense to TBC1D5
-0.0907
58501
ENSG00000285730
novel transcript
-0.0907
58500
ENSG00000285729
novel transcript
-0.0907
58499
ENSG00000285728
novel transcript, antisense to PPIH
-0.0907
58498
ENSG00000285727
novel transcript
-0.0907
58497
ENSG00000285726
novel transcript
-0.0907
58496
ENSG00000285725
novel transcript
-0.0907
58495
ENSG00000285724
novel transcript
-0.0907
58494
ENSG00000285723
novel protein
-0.0907
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
download
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