SHOGoiN Cell Transcriptome: GSM1677532

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677532


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T60The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 140.7239
2 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 103.9943
3 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 84.2617
4 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 38.0588
5 ENSG00000184009 ACTG1 actin gamma 1 37.1870
6 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 36.7876
7 ENSG00000174444 RPL4 ribosomal protein L4 27.4002
8 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 24.3641
9 ENSG00000089157 RPLP0 ribosomal protein lateral stalk subunit P0 23.9303
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 21.5470

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285745 general transcription factor IIH subunit 5 (GTF2H5) pseudogene -0.0880
58502 ENSG00000285744 novel transcript -0.0880
58501 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0880
58500 ENSG00000285742 novel transcript -0.0880
58499 ENSG00000285741 novel transcript -0.0880
58498 ENSG00000285740 novel transcript -0.0880
58497 ENSG00000285739 novel transcript, antisense to NRG3 -0.0880
58496 ENSG00000285738 Novel transcript -0.0880
58495 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0880
58494 ENSG00000285736 Novel transcript -0.0880

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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